PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU00507.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family Trihelix
Protein Properties Length: 499aa    MW: 56603.5 Da    PI: 8.4163
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU00507.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix93.81.7e-2953136186
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 rW+++e+laL+++r+em+ ++r+++lk plW+e+s+km+e g++r++k+C+ek+en+ k++k++k+g+++r  ++ +++++f+qle
  PHU00507.1  53 RWPHEETLALLKIRSEMDLAFRDSNLKSPLWDEISRKMAELGYNRNAKKCREKFENIYKYHKRTKDGRSGR--QNGKNYRFFEQLE 136
                 8********************************************************************98..45567******97 PP
2trihelix97.61.1e-30367452186
    trihelix   1 rWtkqevlaLiearremeerlrr.gklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 rW+k ev aLi++r++ + ++++ g++k+plWe++s+ m++ g+ r++k+Ckekwen+nk+y+++ke++kkr +e+s+tcpyf+ql+
  PHU00507.1 367 RWPKAEVEALIRLRTNADLQYQDnGSSKGPLWEDISSGMKKLGYDRNAKRCKEKWENINKYYRRVKESQKKR-PEDSKTCPYFHQLD 452
                 8*********************7589*********************************************8.99**********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 499 aa     Download sequence    
MLESSVLLES TATTVVTGGA AGSQAAELKN DGGGGGGGGG SEEDKSYSGG GNRWPHEETL  60
ALLKIRSEMD LAFRDSNLKS PLWDEISRKM AELGYNRNAK KCREKFENIY KYHKRTKDGR  120
SGRQNGKNYR FFEQLELLDS QSLLSSPPSN HMLINRMDAM PVPMPMPMTM IKPATSGCQD  180
FRMDPSQTRG FNPEFMSTST STRKMSTSTS TTSSSGKESN GSRLMKEVLD KQEDLQNKFL  240
EAIEKCEKDR KARDEAWKMQ EMARLKKEQE ALAHERAISA AKDAAVIAFL QKISEQTIQL  300
PLPTDLPQVS QRHTEEREST ESMKTVGSQE NVLQLDNDKE ENTLEKNIDK QEIDSAGENS  360
FQMSSSRWPK AEVEALIRLR TNADLQYQDN GSSKGPLWED ISSGMKKLGY DRNAKRCKEK  420
WENINKYYRR VKESQKKRPE DSKTCPYFHQ LDSIYQNKSK KQLPISENPS SNMKASEILM  480
QIINQQQQQQ QQQQSEIVK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76880.11e-66Trihelix family protein