PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU00646.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 192aa    MW: 21180.7 Da    PI: 4.5687
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU00646.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.83.2e-1953102255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                  y+GVr++  +g+WvAeIr+p   + r +r++lg+f t  eAa+a++ a+++l+g
  PHU00646.1  53 TYRGVRQRT-WGKWVAEIREP---N-RgARIWLGTFNTSLEAARAYDDAARRLYG 102
                 69****999.**********8...3.35*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    
MAESVESVSV CIPIVEEPKS DTNNSPTVKK STVGRSRKGC MRGKGGPENA LCTYRGVRQR  60
TWGKWVAEIR EPNRGARIWL GTFNTSLEAA RAYDDAARRL YGADAKLNLS ESSEESPLAD  120
KEFISRPETC MENIIEGGEC SVLEEASIFK DGNGEYLVWE TPVPSLMGEQ DHNIMMSGLD  180
FPGDNTGLNW IN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18450.11e-34ERF family protein