PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU00710.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NF-YB

Protein Properties

Length: 161aa MW: 17920.5 Da PI: 6.267

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU00710.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	171	1.3e-53	26	118	2	94
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrele 94 req+r+lPian++rimkk+lPan+ki+kd+k+tvqecvsefisf+tseasdkcq+ekrktingddll alatlGfedy+eplkvyl++yre+ PHU00710.1 26 REQERYLPIANIGRIMKKALPANGKIAKDSKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLSALATLGFEDYIEPLKVYLTRYREVT 118 89*****************************************************************************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 161 aa Download sequence
MAEPASSGGG GSHESGGDPS PQSNLREQER YLPIANIGRI MKKALPANGK IAKDSKDTVQ 60 ECVSEFISFI TSEASDKCQK EKRKTINGDD LLSALATLGF EDYIEPLKVY LTRYREVTAV 120 SISLMFLGLV SHRTALFSQF HVLLGFLIIW FARELIREYM D

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38880.2	4e-59	NF-YB family protein