PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU00802.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family MYB_related
Protein Properties Length: 242aa    MW: 27021.9 Da    PI: 9.2249
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU00802.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding56.75.5e-181462148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.kgRtlkqcksrwqkyl 48
                     +g+WT+eEd++l++ +k++G g+W++ ++++  ++R++k+c++rw +yl
       PHU00802.1 14 KGPWTPEEDQKLINHIKKHGHGSWRALPNKLAgLNRCGKSCRLRWTNYL 62
                     79*********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
MGRSPSCDET GLKKGPWTPE EDQKLINHIK KHGHGSWRAL PNKLAGLNRC GKSCRLRWTN  60
YLRPDIKRGK FTQDEQKTIL SLHAILGNNL PHLIALANLK ELVEHHHSSW EGQQAAIAIR  120
SLQTEVATLQ YLHLLLQTPN MPANNTTISA NIPEIEAYNN LLNSMKADQI IIGNNSLNNI  180
IPPPNSTSLQ DSIPFSHLPE LQASSSFHLS TSLHKKEIIK TPTTIYYFTM AASFFSGSCC  240
NK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G34670.14e-54MYB family protein