PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU00854.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family GRAS
Protein Properties Length: 93aa    MW: 10075.7 Da    PI: 8.9128
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU00854.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS35.81.2e-112286136199
        GRAS 136 pegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpg 199
                 p+gpp++RiTg +++ s   +   ++ + +rL+++ +++++pfef++ va +++++e+++L+v+p+
  PHU00854.1  22 PGGPPRIRITGTDDSISAyaRGGGIKIVDRRLSSVIASCNIPFEFHP-VAASCSNVEIKHLNVRPD 86 
                 489***********877788999************************.7999***********997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 93 aa     Download sequence    
MMEIMHRGDL KEVLIVCAKP GPGGPPRIRI TGTDDSISAY ARGGGIKIVD RRLSSVIASC  60
NIPFEFHPVA ASCSNVEIKH LNVRPDSRFA PYA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17230.18e-13GRAS family protein