PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU00930.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 222aa    MW: 24935.6 Da    PI: 4.6364
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU00930.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.27.4e-174392255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                 y+GVr++  + +Wv+e+r+pse   +kr++lg++ tae+Aa+a++ a+++l+g
  PHU00930.1 43 IYRGVRRRN-NDKWVCEVREPSE---QKRIWLGSYLTAEMAARAHDVAALALRG 92
                69****887.8*********976...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    
MNNSSSCSSV RMEASDEESF LLASSKPKKN AGRKKFKETR HPIYRGVRRR NNDKWVCEVR  60
EPSEQKRIWL GSYLTAEMAA RAHDVAALAL RGQLATLNFA DSAWLLQVPV SNDPKELRQA  120
AARAAEAFGP RGNSNVNVDV DIGDEEMKEV EPQDNVVDNY NVVVEENGSN VMHSSSCGIE  180
EWQANMEQGC MFSPNPCLYG NHFSWDEDVE SDVEVSLWNY SL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12610.19e-42ERF family protein