PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU01059.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NF-YA
Protein Properties Length: 231aa    MW: 25302 Da    PI: 10.4524
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU01059.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA33.71.2e-10208229324
   CBFB_NFYA   3 plYVNaKQyqrIlkRRqkRakl 24 
                 p+YVNaKQy++IlkRRq Rak 
  PHU01059.1 208 PIYVNAKQYSAILKRRQVRAKR 229
                 9*******************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MRISSPGPVV ELAPHPRPIE IFPCAGKFGL RGGIPDSSKL QPEEVGSGSW YRKRLLIPSS  60
KKGSAMGPPQ GYLXARKLMT LMSDPIVLSG ISPRRRDPSD RGLDTYQRYI LLTSSELPCK  120
LHLYGKPTSP LSPTVVADGS GKDERTNEVF GPDGMGGNAT ESTLFKGDLR KLVLGLNGFG  180
WQIWLRCAQV GVTSTRVALS LEYTESLPIY VNAKQYSAIL KRRQVRAKRQ A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G54160.11e-07NF-YA family protein