PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU01295.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family MYB_related
Protein Properties Length: 89aa    MW: 10480.7 Da    PI: 9.3983
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU01295.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding35.81.9e-11346344
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44
                      WTt   +++ da +++ ++   +W+ Iar++g g++++++k ++
       PHU01295.1  3 TWTTKQNKKFEDALALYDKDtpdRWHNIARYVG-GKSAEEVKRHY 46
                     6********************************.**********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 89 aa     Download sequence    
MATWTTKQNK KFEDALALYD KDTPDRWHNI ARYVGGKSAE EVKRHYELLE KDVMKIENDQ  60
VPLPNYRANA SNGRSNYANE QRLLQNLRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.22e-35MYB_related family protein