PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU01299.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family MYB_related
Protein Properties Length: 87aa    MW: 10243.5 Da    PI: 4.8182
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU01299.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like21.64.8e-07451352
     G2-like  3 rlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQk 52
                 l Wt e H++F +av+   G +  tP   + l+ v g t e+vk H  k
  PHU01299.1  4 NLTWTWEQHKKFANAVAIY-GFD-ETPGMWRYLIWVTGKTEEEVKLHYEK 51
                689****************.565.49********************9766 PP
2Myb_DNA-binding271e-08553248
                     SSS-HHHHHHHHHHHHHTTTT....-HHHHHHHHT..TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGgg....tWktIartmg..kgRtlkqcksrwqkyl 48
                     + WT e ++++++av+ +G +     W+    ++   +g+t++++k+++ k++
       PHU01299.1  5 LTWTWEQHKKFANAVAIYGFDetpgMWR----YLIwvTGKTEEEVKLHYEKLM 53
                     58*******************8666333....3334559**********9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 87 aa     Download sequence    
MAANLTWTWE QHKKFANAVA IYGFDETPGM WRYLIWVTGK TEEEVKLHYE KLMRGIRNIE  60
TGLLRLPENE DVIDGLNNNG NNRQDYD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.26e-12MYB_related family protein