PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU01537.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family WRKY
Protein Properties Length: 255aa    MW: 27607 Da    PI: 10.8288
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU01537.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY56.65e-18193251259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                  D+++WrKYGqK++kgs++pr         + + kk+ver+ +dp ++++tYe+eH+h+
  PHU01537.1 193 ADECSWRKYGQKPIKGSPYPRLITSLPVFsNVQHKKHVERAMDDPMMLIMTYEEEHRHT 251
                 699******************987654435****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    
MVGRTGHARL RRAPVQAVQA QAQAKVQVHV HDSLTSLSLS PHGYMEKERV FAPAPLFVVA  60
PVAALVPTGL MLGFRKLRVN VVVAAGASGG ASVGDMKWKD AFGSMKNGIS SSFLSSATGE  120
GSRSISSVAL SSSSMLLRLM VQAISTGKQP SATGKKCHEQ EQSSDGSGKK RKVFPKKVIR  180
TPVISSKITD IPADECSWRK YGQKPIKGSP YPRLITSLPV FSNVQHKKHV ERAMDDPMML  240
IMTYEEEHRH TQVAM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31550.21e-34WRKY family protein