PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU01738.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family GATA
Protein Properties Length: 170aa    MW: 18588.9 Da    PI: 10.285
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU01738.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA59.93.2e-193872135
        GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
                C+ CgttkTplWR gp g+k+LCnaCG++ rkk++
  PHU01738.1 38 CADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRR 72
                ********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    
MVDISDKVGD HKVQETEEMS GRSKTPERVS LETSQKTCAD CGTTKTPLWR GGPAGPKSLC  60
NACGIRSRKK RRALLGLNKE DKKAKKSSNK SIDNHPRHHQ NQSSNSSSTS SSGESTTSKA  120
VVETNECIPF KKRALHFGRP KLNSTHTRKL SEEEQAAFLL MALSCGSVYA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16990KKRRALLGLNKEDKKAKKSSNK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16870.12e-26GATA family protein