PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU01739.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

ARR-B

Protein Properties

Length: 568aa MW: 63789 Da PI: 5.4656

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU01739.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	79.7	3.5e-25	193	246	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+ W+peLHe+F++a++qLGG k +P++il+lm+v gL +ehv+SHLQkYRl PHU01739.1 193 KARVLWSPELHEKFIQAINQLGGDSK-IPQKILKLMNVSGLEREHVASHLQKYRL 246 689****************88775.9************************8 PP
2	Myb_DNA-binding	43.7	6.3e-14	197	245	3	48
SS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 W++e++e++++a++qlGg+ + +I + m+ g+ ++++ s++qky+ PHU01739.1 197 LWSPELHEKFIQAINQLGGDskIPQKILKLMNvSGLEREHVASHLQKYR 245 6***********************************************7 PP
3	Response_reg	80.7	4.9e-27	22	130	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 +l+vdD+p+ +++l+ +l+k +y ev++++++e al ll+e++ ++li+ D+ mp+mdG++l++ i e +lp+i+++ ++ + + +a+ Ga+ PHU01739.1 22 LLVVDDDPSCLRVLECMLKKCHY-EVTTCEHAEVALSLLRENRnnFHLIISDVHMPDMDGFKLVELIVLEM-NLPVIMMSVDDSRSVIMKAVIHGAH 116 599******************.***********999889******************8865.9******************** PP EEEESS--HHHHHH CS Response_reg 96 dflsKpfdpeelvk 109 d+l+Kp+++e+l + PHU01739.1 117 DYLVKPVSIEALKN 130 ********9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 568 aa Download sequence
MATSGECLNS GGFSGEFPTF RLLVVDDDPS CLRVLECMLK KCHYEVTTCE HAEVALSLLR 60 ENRNNFHLII SDVHMPDMDG FKLVELIVLE MNLPVIMMSV DDSRSVIMKA VIHGAHDYLV 120 KPVSIEALKN IWQHVVRQNK DEWKGKILDR LGNVEGAEYS DAAKEGRLKS SKKRNDKEEN 180 EIGERNDTNT VKKARVLWSP ELHEKFIQAI NQLGGDSKIP QKILKLMNVS GLEREHVASH 240 LQKYRLQLQK NRSGLESGFM GHSEVTIGTL LNNPDVQTLA PMDQHPVQNL TTHQGPTWVR 300 PKSPIFIKEP TWGSPTTKSP IFMQRNHLSF QNPVLRYQGP QQMNNSNKQV NLPCGIPTTE 360 QFLRMNIPVA RIFQPQLQVQ NMLSESNKIL SQNGIVDDTR DSMYNQVPRT AVDFSLNQNI 420 PLAGTNFLLS ANSTVSATTE QVNIGYDNFS ELCQQKAQDW GLQNVVGSTF DALMEQNGQN 480 VNAPIAEAVF SSRQEIGHVN PIDGPQVNSV KAAERYTDSS YQSTIFLEPF EQDNDLMSAL 540 LEQQHESSVG QVDSVFGHDE DAFENLPV

Sequence ? help Back to Top

Protein Sequence Length: 568 aa Download sequence

MATSGECLNS GGFSGEFPTF RLLVVDDDPS CLRVLECMLK KCHYEVTTCE HAEVALSLLR  60
ENRNNFHLII SDVHMPDMDG FKLVELIVLE MNLPVIMMSV DDSRSVIMKA VIHGAHDYLV  120
KPVSIEALKN IWQHVVRQNK DEWKGKILDR LGNVEGAEYS DAAKEGRLKS SKKRNDKEEN  180
EIGERNDTNT VKKARVLWSP ELHEKFIQAI NQLGGDSKIP QKILKLMNVS GLEREHVASH  240
LQKYRLQLQK NRSGLESGFM GHSEVTIGTL LNNPDVQTLA PMDQHPVQNL TTHQGPTWVR  300
PKSPIFIKEP TWGSPTTKSP IFMQRNHLSF QNPVLRYQGP QQMNNSNKQV NLPCGIPTTE  360
QFLRMNIPVA RIFQPQLQVQ NMLSESNKIL SQNGIVDDTR DSMYNQVPRT AVDFSLNQNI  420
PLAGTNFLLS ANSTVSATTE QVNIGYDNFS ELCQQKAQDW GLQNVVGSTF DALMEQNGQN  480
VNAPIAEAVF SSRQEIGHVN PIDGPQVNSV KAAERYTDSS YQSTIFLEPF EQDNDLMSAL  540
LEQQHESSVG QVDSVFGHDE DAFENLPV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	1e-103	ARR-B family protein