PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU01863.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

HD-ZIP

Protein Properties

Length: 209aa MW: 23982.8 Da PI: 5.4705

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU01863.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	59.6	5.2e-19	86	140	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++tk+q Lee F++n++++ +e+e LA++l+L +rqV vWFqNrRa+ k PHU01863.1 86 RKKLRLTKQQSFLLEESFRQNHTLNPKEKEALAMQLKLRTRQVEVWFQNRRARSK 140 78889************************************************98 PP
2	HD-ZIP_I/II	110.7	9.6e-36	86	174	1	89
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLre 89 +kk+rl+k+q+ lLEesF+++++L+p++K++la +L+l++rqv+vWFqnrRAR k+kq+E+++e+Lkr++ +l+e+n+rL+keveeLr+ PHU01863.1 86 RKKLRLTKQQSFLLEESFRQNHTLNPKEKEALAMQLKLRTRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLKKEVEELRA 174 69*************************************************************************************94 PP

Sequence ? help Back to Top
Protein Sequence Length: 209 aa Download sequence
MEIMPENSTC LELTISIPGS SSNSSSFPSP GGGGGGYNMM RELDINQVPS SGNINEEESM 60 EEDQDQEEEE ESSNNNNNNN NGVPPRKKLR LTKQQSFLLE ESFRQNHTLN PKEKEALAMQ 120 LKLRTRQVEV WFQNRRARSK LKQTEMECEY LKRWFGSLTE QNRRLKKEVE ELRAMKVGVL 180 SPHTCPSTLT MCPHCERVTT TTIRDESRI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	135	143	RRARSKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01430.1	2e-61	HD-ZIP family protein