PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU01940.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

bHLH

Protein Properties

Length: 789aa MW: 90241.8 Da PI: 6.5726

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU01940.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	12.7	0.00023	136	165	3	31
HHHHHHHHHHHHHHHHHHHHHHCTSCC.C. CS HLH 3 rahnerErrRRdriNsafeeLrellPk.as 31 +++n+ E+r+R ++ + f r+ lP+ ++ PHU01940.1 136 KKANILEQRYRTNVGELFGHVRKKLPWaDP 165 578************************443 PP

Sequence ? help Back to Top
Protein Sequence Length: 789 aa Download sequence
MVKEDSNVLD LFLKIGLDEK TAKNTLANNK VTTNLTAVIH EAAVTDGCDR AVGNLLYTVA 60 TKFPANALNH RPTLLQYIVS TKIKTPAQLE AAFAYLSATA SENLKVHDFE EACGVAGVEV 120 SKDEIERAVS EVFEEKKANI LEQRYRTNVG ELFGHVRKKL PWADPKVVKE VVDLELYKLL 180 GERTAADNEK PVKKKKEKPV KTEDKAKVEE TSAPKQSEEE LNPYLIFPSP EENYKVHTEV 240 YFSDQSVLRA CNSKELLEKH LKVTGGKVQT RFPPEPNGFL HIGHAKAMFV DFGLAKDRGG 300 GCYLRFDDTN PEAEKKEYID HIKEIVGWMG WEPFKITYTS DYFQDLYQLA VELIRRGHAY 360 VDHQTPDEVK EYREKKMNSP WRDRPIEESL RLFDEMKRGM IDEGKATLRM KQDMQNDNFN 420 MYDLIAYRFT PHPHAGDKWC IYPSYDYAHC IVDSLENITH SLCTLEFETR RASYYWLLDA 480 LSLYQPFVWE YSRLNVSNTV MSKRKLNRLV TEKWVDGWDD PRLMTLAGLR RRGVTSTAIN 540 AFVRGIGITR SDSSMIQLSR LEYHIREELN KTAARTLVVL NPLKVFITNL EAGLVMDLDA 600 KKWPEAPADD ASSFYKVPFS RVVYIERSDF RLKDSKDYYG LAPGKSVLLR YAYPIKCTDV 660 ILADDKETVL EIRAEYDPSK TIKPKGVLHW VAEPSPGVDP LKVEVRLFDR LFCSENPAEL 720 DDWLGDLNPE SKVVIQNAYA VPSVSKAALG DRFQFERLGY FAVDKDSTSE KLVFNRTVTL 780 RDNYAKGGK

Sequence ? help Back to Top

Protein Sequence Length: 789 aa Download sequence

MVKEDSNVLD LFLKIGLDEK TAKNTLANNK VTTNLTAVIH EAAVTDGCDR AVGNLLYTVA  60
TKFPANALNH RPTLLQYIVS TKIKTPAQLE AAFAYLSATA SENLKVHDFE EACGVAGVEV  120
SKDEIERAVS EVFEEKKANI LEQRYRTNVG ELFGHVRKKL PWADPKVVKE VVDLELYKLL  180
GERTAADNEK PVKKKKEKPV KTEDKAKVEE TSAPKQSEEE LNPYLIFPSP EENYKVHTEV  240
YFSDQSVLRA CNSKELLEKH LKVTGGKVQT RFPPEPNGFL HIGHAKAMFV DFGLAKDRGG  300
GCYLRFDDTN PEAEKKEYID HIKEIVGWMG WEPFKITYTS DYFQDLYQLA VELIRRGHAY  360
VDHQTPDEVK EYREKKMNSP WRDRPIEESL RLFDEMKRGM IDEGKATLRM KQDMQNDNFN  420
MYDLIAYRFT PHPHAGDKWC IYPSYDYAHC IVDSLENITH SLCTLEFETR RASYYWLLDA  480
LSLYQPFVWE YSRLNVSNTV MSKRKLNRLV TEKWVDGWDD PRLMTLAGLR RRGVTSTAIN  540
AFVRGIGITR SDSSMIQLSR LEYHIREELN KTAARTLVVL NPLKVFITNL EAGLVMDLDA  600
KKWPEAPADD ASSFYKVPFS RVVYIERSDF RLKDSKDYYG LAPGKSVLLR YAYPIKCTDV  660
ILADDKETVL EIRAEYDPSK TIKPKGVLHW VAEPSPGVDP LKVEVRLFDR LFCSENPAEL  720
DDWLGDLNPE SKVVIQNAYA VPSVSKAALG DRFQFERLGY FAVDKDSTSE KLVFNRTVTL  780
RDNYAKGGK