PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU02022.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 222aa    MW: 24705.9 Da    PI: 9.3521
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU02022.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP234.26.5e-11108148650
         AP2   6 VrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaar 50 
                 Vr +k +g+++ eIrd +     + kr++lg+f taeeA + +   +
  PHU02022.1 108 VRKRK-SGKFATEIRDpF-----SkKRIWLGTFNTAEEASEVYQSKK 148
                 89888.7*********66.....44**************99886655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    
MVRKRKCGKL GTEEKLKVAI FAKSENGSSG DLPLMADSQT SDSLKSKKFT TESEEELKVA  60
KNAKVKRAIS AKSDIGSSSS EVKIQSLSLI NRKSLSFDQV SGKLPPMVRK RKSGKFATEI  120
RDPFSKKRIW LGTFNTAEEA SEVYQSKKLE FQENDPSSTV DSQTSDSSND QESEEELWMG  180
QWIRISGDKE VKFSQKLGVP VVDNYGFLLG EFSKLDDLSI SL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28370.14e-14ERF family protein