PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU02064.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

G2-like

Protein Properties

Length: 402aa MW: 45752.9 Da PI: 6.5589

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU02064.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	102.8	2.2e-32	220	275	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+peLH+rF++a++qLGGs++AtPk+i+elmkv+gLt+++vkSHLQkYRl+ PHU02064.1 220 KQRRCWSPELHRRFLQALQQLGGSHVATPKQIRELMKVDGLTNDEVKSHLQKYRLH 275 79****************************************************97 PP
2	Myb_DNA-binding	43.7	6.5e-14	222	273	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W++e++ ++++a +qlGg t+k I + m g+t ++ks++qky+ PHU02064.1 222 RRCWSPELHRRFLQALQQLGGShvaTPKQIRELMKvDGLTNDEVKSHLQKYR 273 568***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 402 aa Download sequence
MMINNNNFNE KMQRCQQYID ALEEERRKIQ VFSRELPLCL ELVTQAIETY KQQLSGTTTE 60 YNLNAQSDEC TDDDEHTSSD VPILEEFIPL KRTFSHEYED QEDAHDEENE SHKSKNNNSN 120 NSTISKDNKS NTKSDWLRSV QLWNQTSDPT LKEVINFYYF LTFNLFLFFL FFFIFKISRN 180 IFFCDYPILG IYLSMYVIIQ LSLALVRLEE NKEEKDGQRK QRRCWSPELH RRFLQALQQL 240 GGSHVATPKQ IRELMKVDGL TNDEVKSHLQ KYRLHTRRPS PSSIHNNNNQ QPPQFVVVGG 300 IWVPPPDYAS MAAVAPAASG EASGVANSNG IYAPIATHAK GPLHDHASLG GTLKQLRQQH 360 NEKPSRSSER DGSHSHSEGG GVHSSSPATS SSTHTTTASP AY

Sequence ? help Back to Top

Protein Sequence Length: 402 aa Download sequence

MMINNNNFNE KMQRCQQYID ALEEERRKIQ VFSRELPLCL ELVTQAIETY KQQLSGTTTE  60
YNLNAQSDEC TDDDEHTSSD VPILEEFIPL KRTFSHEYED QEDAHDEENE SHKSKNNNSN  120
NSTISKDNKS NTKSDWLRSV QLWNQTSDPT LKEVINFYYF LTFNLFLFFL FFFIFKISRN  180
IFFCDYPILG IYLSMYVIIQ LSLALVRLEE NKEEKDGQRK QRRCWSPELH RRFLQALQQL  240
GGSHVATPKQ IRELMKVDGL TNDEVKSHLQ KYRLHTRRPS PSSIHNNNNQ QPPQFVVVGG  300
IWVPPPDYAS MAAVAPAASG EASGVANSNG IYAPIATHAK GPLHDHASLG GTLKQLRQQH  360
NEKPSRSSER DGSHSHSEGG GVHSSSPATS SSTHTTTASP AY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68670.1	1e-71	G2-like family protein