PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU02226.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

MIKC_MADS

Protein Properties

Length: 243aa MW: 27925.5 Da PI: 7.9931

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU02226.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	98.1	3.7e-31	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 kri+nk+nrqvtf+kRrng+lKKA+ELSvLCdae+a+iifss+gklye++s PHU02226.1 9 KRIDNKINRQVTFAKRRNGLLKKAYELSVLCDAEIALIIFSSRGKLYEFCS 59 79***********************************************96 PP
2	K-box	97.1	2.7e-32	82	173	9	100
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 + +a++++ +qe+ kLk ++e Lq++qRh+lGedL++L+ k+L+qLe+qL++sl++iRs+K++++++q+ el +ke++l e nk+L++klee PHU02226.1 82 QPSADSQNNYQEYLKLKTRVEVLQQSQRHILGEDLGELNTKDLEQLERQLDSSLRQIRSTKTQHMFDQLAELHQKEQSLTEMNKSLKTKLEE 173 467789***********************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 243 aa Download sequence
MGRGKVELKR IDNKINRQVT FAKRRNGLLK KAYELSVLCD AEIALIIFSS RGKLYEFCSS 60 SSMSKTLERY HKHNYGALEG TQPSADSQNN YQEYLKLKTR VEVLQQSQRH ILGEDLGELN 120 TKDLEQLERQ LDSSLRQIRS TKTQHMFDQL AELHQKEQSL TEMNKSLKTK LEELGVACQT 180 SWHSGPGEQS VQYRQQQPEG FFQQVDCNNH TVPDMRYGYD NVPLEYAAPS TQHALGVVPG 240 WML

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15800.1	7e-92	MIKC_MADS family protein