PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU02233.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 360aa    MW: 41070.9 Da    PI: 4.6524
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU02233.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.21.4e-08203248754
                 HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH   7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                  +Er+RR+++ + +++Lr l+P+       +K   ++ Le+ v+Y+k+L
  PHU02233.1 203 DVERQRRRDMAKLYQRLRLLIPSkY---LMGKRAISDHLEEIVDYVKDL 248
                 69*********************77...999****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 360 aa     Download sequence    
MDDFELDFDQ LDQLLNILSP PTLQKQDSSI LLQTHSSNDL DSHQNDEPII TTTTTIFDDD  60
QLFNFLSSPP PSPRPPLTST LQNDDYSSIL LQTHSSNDLD SHQNDEPIIT TTTTIFDDDQ  120
LFNFLSTPSP SPHPALTSTL QKEDDSSISL QTRQSSNDLD NHQKDEPINT TTTIVDDNQV  180
QDPMKKKEVE EKKKKNKNVL RRDVERQRRR DMAKLYQRLR LLIPSKYLMG KRAISDHLEE  240
IVDYVKDLRK DIEELERKRE SLKEKKNMTP SSSSSSMKLS DDEDRIIVKS CNEEVEISVK  300
GGISISKVVK VVMKEGLIVN SCVSSTVDQS LHHIIQSEVN TRADIDFAML QTKLLSLYEP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1192202KKKKNKNVLRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12540.12e-09bHLH family protein