PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU02555.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 407aa MW: 45788.2 Da PI: 7.3547

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU02555.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	169.2	1.3e-52	16	143	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 + pGfrFhPtdeelv +yL++kv++k++++ e ik++diyk++PwdLpk ++ +ekewyf+++rd+ky+++ r+nr+t +g+Wkatg+d++++s+ +++ PHU02555.1 16 MLPGFRFHPTDEELVGFYLRRKVQQKPISI-ELIKQLDIYKYDPWDLPKLAAVGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSeGSK 113 579*************************.89***********8778899***********************************95667 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 +glkk+Lvfykgra kg ktdW+mhe+rl PHU02555.1 114 CIGLKKSLVFYKGRAAKGIKTDWMMHEFRL 143 7*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 407 aa Download sequence
MEERKEKEKS TMDEVMLPGF RFHPTDEELV GFYLRRKVQQ KPISIELIKQ LDIYKYDPWD 60 LPKLAAVGEK EWYFYCPRDR KYRNSARPNR VTGAGFWKAT GTDRPIYSSE GSKCIGLKKS 120 LVFYKGRAAK GIKTDWMMHE FRLPSITDST APKRFLDKHI PPNCTQYTLS XKANSNAHRA 180 LSHSWVSPPP LPQAQSNTTL SHDFLASSHF SNSDEMSLFI HKTNTTSPIQ FNDLQNSSNN 240 LASFSTLDLP LYKTLNSISS YNNKPPQQIS ISNHHDPITT SYTFSSSCVE NMNNIDASSL 300 LLNMSSSIFG DYSIALPESM EGGGGGGVHE ETITALKEAN NVINNMEHME EQWGNVVRSN 360 IGVLPLVNNF PLNVAADAWK TSLLWDSSSP CPSSEMSTSY STNKCYT

Sequence ? help Back to Top

Protein Sequence Length: 407 aa Download sequence

MEERKEKEKS TMDEVMLPGF RFHPTDEELV GFYLRRKVQQ KPISIELIKQ LDIYKYDPWD  60
LPKLAAVGEK EWYFYCPRDR KYRNSARPNR VTGAGFWKAT GTDRPIYSSE GSKCIGLKKS  120
LVFYKGRAAK GIKTDWMMHE FRLPSITDST APKRFLDKHI PPNCTQYTLS XKANSNAHRA  180
LSHSWVSPPP LPQAQSNTTL SHDFLASSHF SNSDEMSLFI HKTNTTSPIQ FNDLQNSSNN  240
LASFSTLDLP LYKTLNSISS YNNKPPQQIS ISNHHDPITT SYTFSSSCVE NMNNIDASSL  300
LLNMSSSIFG DYSIALPESM EGGGGGGVHE ETITALKEAN NVINNMEHME EQWGNVVRSN  360
IGVLPLVNNF PLNVAADAWK TSLLWDSSSP CPSSEMSTSY STNKCYT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26870.1	1e-97	NAC family protein