PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU02749.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 264aa    MW: 28995.3 Da    PI: 8.3378
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU02749.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.51.6e-10148195455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +h+ +Er RR++i +++  L++++P +    +k   Ka +L + ++YI+sLq
  PHU02749.1 148 SHSLAERARREKISERMKVLQDIVPGC----NKVIGKALVLDEIINYIQSLQ 195
                 8*************************9....677*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    
MDPQTSLINH AGGFQSPPPP PFNLADIWQF PGNAGGNATA YSFPVSASAV AAVEQEHNMS  60
DVPKSDPMRR ARKRREDDEC AKGVSTSGNG LTESDSKRLK ATRLNENCEA RCDGEGNSRK  120
SAEQPAKPAE PPKDYIHVRA RRGQATDSHS LAERARREKI SERMKVLQDI VPGCNKVIGK  180
ALVLDEIINY IQSLQHQVEF LSMKLEAVNS RAASIEGFRS KDFGHQTFDP NAMAFGSQAT  240
REYARGTSPE RLHMQLGGGF ERTT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16976RRARKRRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.15e-82bHLH family protein