PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU02912.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NF-YC
Protein Properties Length: 153aa    MW: 17063.7 Da    PI: 10.6573
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU02912.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC54.52.6e-17301131597
       NF-YC  15 dfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtd.ifdflvdivp 97 
                 + ++ +lP++r+kki+k d+d+k++ +ea  l++ + elf+  l+ +s   a e++r+t+k   +  av+r + + dfl+d  p
  PHU02912.1  30 ESHQLQLPVSRLKKIMKLDQDIKKVNSEALHLIASSTELFLESLAEKSAQVALEKNRKTMKLEHLRVAVKRHQpTSDFLLDSLP 113
                 556789***************************************************************9976489*****988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 153 aa     Download sequence    
MSTSLSRVVD TMARKDQEGN SIAAVAVAGE SHQLQLPVSR LKKIMKLDQD IKKVNSEALH  60
LIASSTELFL ESLAEKSAQV ALEKNRKTMK LEHLRVAVKR HQPTSDFLLD SLPMPPSQPS  120
DPSPKVQSRR RLAKDKPLPS GTRRIEAFFH NCT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43250.11e-34NF-YC family protein