PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU02980.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

WRKY

Protein Properties

Length: 170aa MW: 19605.3 Da PI: 9.9836

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU02980.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	104.9	4.3e-33	91	149	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK vk+++fprsYYrCt++gC+vkk+v+r ++d+ vv++tYeg H h+ PHU02980.1 91 LDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLSKDEGVVVTTYEGMHSHP 149 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 170 aa Download sequence
MENYPPLFPS SLSSHEFSLM NKKSSNTHAK EVLLFQGKNN GFLGLMASME TPSGVTNSFE 60 DDVMKSCKKK GEKKIKKPRY AFQTRSQVDI LDDGYRWRKY GQKAVKNNKF PRSYYRCTHQ 120 GCNVKKQVQR LSKDEGVVVT TYEGMHSHPI DKSTDNFEHI LSQMQVYTSF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13080.1	1e-59	WRKY family protein