PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU02988.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 403aa    MW: 44514.6 Da    PI: 8.3407
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU02988.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2552e-174998255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                +y+GVr+++ +gr++AeIrdp     +  r +lg+f+taeeAa a++ a+++++g
  PHU02988.1 49 RYRGVRRRP-WGRYAAEIRDPQ----SkERRWLGTFDTAEEAACAYDCAARAMRG 98
                69*******.**********93....35999**********************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 403 aa     Download sequence    
MEDAMRRLNQ ESDLPLQNSK NSSTLTKRSS CATNKRPVKD STSGSSAVRY RGVRRRPWGR  60
YAAEIRDPQS KERRWLGTFD TAEEAACAYD CAARAMRGVK ARTNFVYPPC PSPTQPTSTN  120
DFLNIPSFNY IKSSSSSHQY LGSTLKDLSN RPFFHSSSPY GSTVRGFNST IGSMCQKSNE  180
SLNMLLFREL LSSNSYSTNN ACSTIGNLNV TSTSMPNLYE QALPNFMFNR NVTSGPSLMP  240
TSDTVIPSSS VMTTHVPKFE NIIHSTVNTT TTAIDDSVGM EFFPSEPSDS GLLEEALNGF  300
FPKPKPIKSQ LILPNYSSTN VSTKGERLSN IFPHQQQHQI NEGLNSDFGF LSQTTSSPAS  360
SFPVYNQDYL PANLQVSPGD NMMGDIFQYP DLLSIFSAKL QNA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24590.13e-13ERF family protein