PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU03031.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

bHLH

Protein Properties

Length: 465aa MW: 51871.5 Da PI: 7.8097

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU03031.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.6	1.7e-11	402	447	6	55
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++Er RR ri +++ +L+el+P+ +k + a++L Av+YIk+L+ PHU03031.1 402 SIAERVRRTRISERMRRLQELVPNM----DKQTNTADMLDFAVDYIKELE 447 689*******************7....688*************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 465 aa Download sequence
MKKKIKMDHS RLQQQPITSG LTRYRSAPSS YFSNLLSSTP VTGGGCGYAR DDFSHLQNAR 60 ASNTDIEQVF ARFVASIGNQ NSNSNSDNFC ANQQIQENLT SNMNVRSDFI VPKQEVIQQH 120 QHKRLARHRN SDYSLVSQMN YQNQAQQQIQ QFISPVKKEP ETLQQSTDCV SASRMNYQTQ 180 VQQIDKSRVA TSSAMDNSFV FMTSVNSTSL TSGGGGGSGG GNSNLTRYNS SPAGFFDQIN 240 NDNEYGAMRG IGSYRTGASA ATETSLSTPR SFNTQVGFSS GKPPASPRLM APISEFGDKV 300 LEENSTDNEH KNAESCITDF PMPSWEDSHI LSDDFLKAED NEIEPFSNED ASHNQNNECL 360 ARPPLPLSHH LSLPTSTMEK LLQDSVHLNV RAKRGCATHP RSIAERVRRT RISERMRRLQ 420 ELVPNMDKQT NTADMLDFAV DYIKELEKQV KILAERRAKC TCINK

Sequence ? help Back to Top

Protein Sequence Length: 465 aa Download sequence

MKKKIKMDHS RLQQQPITSG LTRYRSAPSS YFSNLLSSTP VTGGGCGYAR DDFSHLQNAR  60
ASNTDIEQVF ARFVASIGNQ NSNSNSDNFC ANQQIQENLT SNMNVRSDFI VPKQEVIQQH  120
QHKRLARHRN SDYSLVSQMN YQNQAQQQIQ QFISPVKKEP ETLQQSTDCV SASRMNYQTQ  180
VQQIDKSRVA TSSAMDNSFV FMTSVNSTSL TSGGGGGSGG GNSNLTRYNS SPAGFFDQIN  240
NDNEYGAMRG IGSYRTGASA ATETSLSTPR SFNTQVGFSS GKPPASPRLM APISEFGDKV  300
LEENSTDNEH KNAESCITDF PMPSWEDSHI LSDDFLKAED NEIEPFSNED ASHNQNNECL  360
ARPPLPLSHH LSLPTSTMEK LLQDSVHLNV RAKRGCATHP RSIAERVRRT RISERMRRLQ  420
ELVPNMDKQT NTADMLDFAV DYIKELEKQV KILAERRAKC TCINK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42280.1	7e-43	bHLH family protein