PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU03336.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

C2H2

Protein Properties

Length: 172aa MW: 19787.7 Da PI: 9.4419

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU03336.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.1	0.00058	49	71	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C+k+F++ L H +H PHU03336.1 49 FECKTCNKHFPSFQALGGHRASH 71 89**********99999998887 PP

Sequence ? help Back to Top
Protein Sequence Length: 172 aa Download sequence
MTTLKRSREN DMQIEAEAMA NCALMLLSRL NNHNDNNSSS SSDHHINDFE CKTCNKHFPS 60 FQALGGHRAS HNKRPRLFGE YLVQTKKNNK IHKCSICCME FSLGQALGGH MRRHRDEFSK 120 TLMAKIPVLK KSNSSKRIFC LDLNLTPNDY HVDDLKLWPS TLISSPVFRC FF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37430.1	4e-35	C2H2 family protein