PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU03351.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

WOX

Protein Properties

Length: 209aa MW: 23928.2 Da PI: 9.5393

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU03351.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	63	4.3e-20	3	64	1	57
TT--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r +R+++t+eql Lee+++k r+p+a++++ ++++l +++ ++V++WFqN++a++++ PHU03351.1 3 RPTRWSPTPEQLMFLEEMYRKgVRNPNATQIQSITAHLssfgKIEGKNVFYWFQNHKARDRQ 64 569***************99***********************************996 PP
2	Wus_type_Homeobox	113.6	1e-36	5	65	4	64
Wus_type_Homeobox 4 tRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 tRW+PtpeQ++ Lee+y++G+r+Pn+ +iq ita+L+++Gkie+kNVfyWFQN+kaR+rqk PHU03351.1 5 TRWSPTPEQLMFLEEMYRKGVRNPNATQIQSITAHLSSFGKIEGKNVFYWFQNHKARDRQK 65 8***********************************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 209 aa Download sequence
MTRPTRWSPT PEQLMFLEEM YRKGVRNPNA TQIQSITAHL SSFGKIEGKN VFYWFQNHKA 60 RDRQKLKKKL LAQMNQQQIL SQYPIDAHSS TTTTNSNNTN TNATHFHCPT DQYQIFPVTS 120 TGIHQEGGIK EASSQVMTYL YPMDLSRSAD QNMENCMIRP YGKDWILMMN ITPNNLPCYV 180 NRPLKTLSLF PITTTDGLKD QTASSSLSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28610.1	5e-41	WOX family protein