PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU03362.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

WOX

Protein Properties

Length: 195aa MW: 22704.1 Da PI: 9.8156

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU03362.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	58.7	9.9e-19	3	63	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+++t++ql +L++l++k r+p+ ++ + ++++l +++ ++V++WFqN++a++++ PHU03362.1 3 RPRWSPTPQQLMILQDLYRKgLRNPTSTQVQTITTHLslygKIQCKNVFYWFQNHKARDRQ 63 89***************99***********************************996 PP
2	Wus_type_Homeobox	106.6	1.5e-34	2	64	2	64
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 +r+RW+Ptp+Q++iL++ly++Glr+P++ ++q it++L+ yGki+ kNVfyWFQN+kaR+rqk PHU03362.1 2 PRPRWSPTPQQLMILQDLYRKGLRNPTSTQVQTITTHLSLYGKIQCKNVFYWFQNHKARDRQK 64 579***********************************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 195 aa Download sequence
MPRPRWSPTP QQLMILQDLY RKGLRNPTST QVQTITTHLS LYGKIQCKNV FYWFQNHKAR 60 DRQKLRKEML HQKQKNLSDH HDDAPQLQFI TAPNNSIINL DYNFPPNFPP LYPHSPPILV 120 HQAERKDTSS AQMMNNMGNV DFPKQCVTEN GMIRTNVQGW MLMMTDMGPN SIPYCSNRPL 180 ETLELFPIKA TGIKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28610.1	1e-30	WOX family protein