PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU03443.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 212aa MW: 24771 Da PI: 6.5125

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU03443.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	38.3	4.1e-12	8	133	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv..ePwdLpk....kvkaeekewy..fFskrdkkyatgkrknratksgyWkatgkdkev 92 GfrFhPtd + +L+k +++++++ + + +++d+y++ ePw++ + + a ++++y f +k+++ + Wk + + k+v PHU03443.1 8 SGFRFHPTDTKGL-TFLQKFMAKQEMNDSGFiTTNIDVYDSeeEPWKIYSrgvpC-GAADDSLYryFITKKSS------------NLCNWKLQDEGKPV 92 7********99.89*****9998883455688668*7334532.33444454103333322............2346****** PP NAM 93 lsk...kgelvglkktLvfy..kgrapkgektdWvmheyrl 128 ++ ++ ++g+kk + + ++++++ W+m+ey+l PHU03443.1 93 HRDsssSTVVIGCKKKIDYMvnNNEEHREDGHYWLMKEYKL 133 9976555566*****95444555556788****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 212 aa Download sequence
MEQRGVRSGF RFHPTDTKGL TFLQKFMAKQ EMNDSGFITT NIDVYDSEEE PWKIYSRGVP 60 CGAADDSLYR YFITKKSSNL CNWKLQDEGK PVHRDSSSST VVIGCKKKID YMVNNNEEHR 120 EDGHYWLMKE YKLSNVILHQ FDEDRRDFVL CAIKKKFIET FSSEMENVSE EFGAIQLLEK 180 DHSGFRALAR DEMPRHFQTA THVDKVTILV TF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24430.2	3e-06	NAC family protein