PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU03444.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 217aa MW: 24846.1 Da PI: 5.1846

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU03444.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	46.5	1.2e-14	47	173	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv..ePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 GfrFhP+d e + +L+k +++++++ + + +++d+y++ ePw++ + + a ++++y ++ ++k + + g Wk +g+ k+v++ PHU03444.1 47 TGFRFHPNDTEGL-TFLQKFMAKQEMNDSGFiTTNIDVYDSeeEPWKIYSrgvpC-GAVDDSLYRYFITKK----------SSNLGNWKLQGEGKPVYR 133 7********99.99*****9998883455688668*7334432.223334443322222..........234699*******9 PP NAM 95 k...kgelvglkktLvfy...kgrapkgektdWvmheyrl 128 ++ ++g+kk + + ++++++ W+m+ey+l PHU03444.1 134 DsssSTVVIGCKKKMSYMinnNEEHREDDGHYWLMKEYEL 173 86555566******55433444445678****97 PP

Sequence ? help Back to Top
Protein Sequence Length: 217 aa Download sequence
MEMVERMQTL PLPCGGTKAV SRIGSLIETL NSLKASNRGM EQKGVSTGFR FHPNDTEGLT 60 FLQKFMAKQE MNDSGFITTN IDVYDSEEEP WKIYSRGVPC GAVDDSLYRY FITKKSSNLG 120 NWKLQGEGKP VYRDSSSSTV VIGCKKKMSY MINNNEEHRE DDGHYWLMKE YELSNVILHQ 180 FDDDRRDYVL CAIKKKLIET CFSEIENVSE EFGAIQV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G17730.1	9e-09	NAC family protein