PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU03448.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 218aa MW: 25808.4 Da PI: 8.7488

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU03448.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	35.9	2.3e-11	7	134	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv..ePwdLp.k...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 + GfrFhPt e + + +k +e+++++ + + +++d+y++ ePw + + + +a+++ +++F+++++ + g Wk + + k+v PHU03448.1 7 QSGFRFHPTYMEGL-TFFQKFMEKQEMNDSGFiTTNIDVYDSeeEPWMIYsRrvpCGAADDSLYHYFITKKS-----------SNLGNWKLQDEGKPVQ 93 57********99.7889999999988878834566988668**73344332334444456655433...........34699**99999 PP NAM 94 sk...kgelvglkktLvfy...kgrapkgektdWvmheyrl 128 + ++ ++g+kk + + ++++++ W+m+ey+l PHU03448.1 94 RDsstSTVVIGCKKKMHYMvnnNEEHREDDGHYWLMKEYKL 134 975555566******55433444445678****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 218 aa Download sequence
MEHRGVQSGF RFHPTYMEGL TFFQKFMEKQ EMNDSGFITT NIDVYDSEEE PWMIYSRRVP 60 CGAADDSLYH YFITKKSSNL GNWKLQDEGK PVQRDSSTST VVIGCKKKMH YMVNNNEEHR 120 EDDGHYWLMK EYKLSNVILH QFDDDRRDYV LCAIKKKLLR PVLRRWIIFL MNLKQSNAML 180 RGMRDWNARS FSIWADQTRE VPSAGAMLKN EAKAIVRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G09330.3	3e-08	NAC family protein