PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU03580.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 416aa MW: 46758.7 Da PI: 9.2306

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU03580.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	159.9	9.7e-50	48	174	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 + pGfrF Ptdeel+++yLkkkveg++ + evi+ev+i k+ePw+Lp k+v ++++ew+fFs+r +ky++g++++rat+sgyWkatgk+++v+s +++ PHU03580.1 48 MFPGFRFCPTDEELISYYLKKKVEGSDKCV-EVISEVEIWKHEPWNLPaKSVVQSDNEWFFFSPRGRKYPNGSQSKRATESGYWKATGKERNVKS-GSN 144 579**********************777.99***********767778899***********************************.99 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 +g+k+tLvf+ grapkg++t+W+mhey + PHU03580.1 145 MIGTKRTLVFHIGRAPKGQRTQWIMHEYCM 174 ****************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 416 aa Download sequence
MEGGDLLGST SEKKDGEIVK VYNNNNSGSN NDGGEKNVGI TVATASSMFP GFRFCPTDEE 60 LISYYLKKKV EGSDKCVEVI SEVEIWKHEP WNLPAKSVVQ SDNEWFFFSP RGRKYPNGSQ 120 SKRATESGYW KATGKERNVK SGSNMIGTKR TLVFHIGRAP KGQRTQWIMH EYCMTGNSYY 180 QDSMVVCRLR KNNELPLNDT PGNQRNHLAA TNVTTALFEA GQLDGLGLIN GGECCSKEGS 240 SSYSSRSVEQ IESGSESDKL NKELPQHHSS SYWKDRDEED CFADIMKDDI IKLDDSSDRA 300 RHNLLPTITR KIEPSTKPTT SQEAQNLMPQ SHRLPFQGTA NRRLKLQTEK PPRRVKRSEP 360 HEAIKKNSHA RGISRQLINI IPVTRTIPLL LVSLMLLIVY LSLFGVPKQV KSHYSS

Sequence ? help Back to Top

Protein Sequence Length: 416 aa Download sequence

MEGGDLLGST SEKKDGEIVK VYNNNNSGSN NDGGEKNVGI TVATASSMFP GFRFCPTDEE  60
LISYYLKKKV EGSDKCVEVI SEVEIWKHEP WNLPAKSVVQ SDNEWFFFSP RGRKYPNGSQ  120
SKRATESGYW KATGKERNVK SGSNMIGTKR TLVFHIGRAP KGQRTQWIMH EYCMTGNSYY  180
QDSMVVCRLR KNNELPLNDT PGNQRNHLAA TNVTTALFEA GQLDGLGLIN GGECCSKEGS  240
SSYSSRSVEQ IESGSESDKL NKELPQHHSS SYWKDRDEED CFADIMKDDI IKLDDSSDRA  300
RHNLLPTITR KIEPSTKPTT SQEAQNLMPQ SHRLPFQGTA NRRLKLQTEK PPRRVKRSEP  360
HEAIKKNSHA RGISRQLINI IPVTRTIPLL LVSLMLLIVY LSLFGVPKQV KSHYSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22290.1	9e-77	NAC family protein