PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU03665.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NF-YB
Protein Properties Length: 176aa    MW: 19702 Da    PI: 4.6324
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU03665.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB46.77.6e-1527123596
       NF-YB   5 drflPianvsrimkkvlP...anakis..kdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 
                 ++ lP a + r++k  l    +++ is  kd+     e +  fi ++++ a+d c++ kr+ in++d++ al ++ f +++eplk+ l+ +re +++
  PHU03665.1  27 QEGLPKAIIRRLVKDKLSqlsTDSDISllKDSLTAFSESARIFIHYLSATANDICKESKRQIINAEDVFKALEDIEFPEFIEPLKASLEVFREKKRK 123
                 556999*******9876511156677655999999**********************************************************8876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    
MGEIEKNNKD KEIEKEKAGG TTVQIEQEGL PKAIIRRLVK DKLSQLSTDS DISLLKDSLT  60
AFSESARIFI HYLSATANDI CKESKRQIIN AEDVFKALED IEFPEFIEPL KASLEVFREK  120
KRKSSSSKSP ESNKKAKVKE PVENGKGKMK ELPSDNENED GQAGEEINEV EDSADD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1120150KKRKSSSSKSPESNKKAKVKEPVENGKGKMK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27470.14e-38NF-YB family protein