PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU03689.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 258aa MW: 29668.6 Da PI: 8.5599

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU03689.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	144.4	6.4e-45	6	136	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 pGfrF Pt+eel+++yL+kk+egk+ +l++vi+ v iy+++Pw+Lp+ + +++++w+fF++r++++a+g r+ r+t+sgyWkatg+ v+s+ PHU03689.1 6 SPGFRFYPTEEELISFYLHKKLEGKTPKLDRVIPVVTIYDLDPWHLPNchgelC-MGDREQWFFFVPRQEREARGGRPCRTTTSGYWKATGSPSYVYST 103 69*************************999***********6455432.23667*********************************** PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++++g+kk++vfykg+ap+g kt+W m+eyr+ PHU03689.1 104 NSKVIGVKKSMVFYKGKAPTGGKTKWKMNEYRA 136 *****************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 258 aa Download sequence
MGEIISPGFR FYPTEEELIS FYLHKKLEGK TPKLDRVIPV VTIYDLDPWH LPNCHGELCM 60 GDREQWFFFV PRQEREARGG RPCRTTTSGY WKATGSPSYV YSTNSKVIGV KKSMVFYKGK 120 APTGGKTKWK MNEYRAIQEE NNSTTSSTFS IPKLRHEMSL CRVYVISGSF RAFDRRPVAP 180 LITTSEPSKS VIKENVNKME ATSSLDEESL AIQEQDYLNY FHGDQNPNVN EAITKRVKSD 240 LHDVPFSGWE LFDGRYLH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22380.1	4e-82	NAC family protein