PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU03806.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 190aa    MW: 22512.2 Da    PI: 10.0479
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU03806.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B348.61.4e-151495599
                -..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3  5 ltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                      +k+g + +p  f+ ++ +g+  e+++  +  ++g++W +kl  + k+    ++kGW eF+++n+++ gD++vF+++g++ef   v +f++
  PHU03806.1 14 V--QPGFKHG-IKIPVGFL-KYlKGE--EHIEHAILKRNGKRWLIKL--NDKR----FEKGWGEFAEENDVQLGDMLVFRYEGNMEF--EVCIFDS 95
                4..4556665.9*******.564666..67789999***********..7777....9*************************9999..9999886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    
MNIPPKKPHF FKPVQPGFKH GIKIPVGFLK YLKGEEHIEH AILKRNGKRW LIKLNDKRFE  60
KGWGEFAEEN DVQLGDMLVF RYEGNMEFEV CIFDSTHCDR EYAEYLQEER GGGFCLLEEI  120
SKKFKFKERP RPRIKLSKKA SSRVKAIVHH KSFGSHFDYT INSRCFLVSF KIHYFLRTLQ  180
VNVLRNQVTC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31640.12e-20B3 family protein