PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU03807.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 118aa    MW: 13609.6 Da    PI: 9.4323
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU03807.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B346.85.2e-1527110188
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 
                 f+++l +++++++ +l++p +fa+++g  + ++ +++l+de  r W+v +   + +  + +t+GW +F  ++gL++gD   F+l+++ 
  PHU03807.1  27 FISTL-KPYSFSKPNLYFPMDFAKSNGWMN-RKCEMILKDEAERCWSVWI--GRMGHNFGITRGWTNFRVEKGLQVGDAYKFELIKNG 110
                 44555.778888888***********5443.4459***************..888888*************************99863 PP
Sequence ? help Back to Top
Protein Sequence    Length: 118 aa     Download sequence    
MKKPSSMSLL DAQVATSTSG DDDHPYFIST LKPYSFSKPN LYFPMDFAKS NGWMNRKCEM  60
ILKDEAERCW SVWIGRMGHN FGITRGWTNF RVEKGLQVGD AYKFELIKNG KVPIAYFH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24700.11e-14B3 family protein