PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU04111.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

MYB

Protein Properties

Length: 225aa MW: 25981.2 Da PI: 8.4884

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU04111.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55	1.8e-17	16	63	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+ ++++G g+W++ ++ g+ R++k+c++rw +yl PHU04111.1 16 KGPWTPEEDLKLISFIQKHGHGNWRALPKQAGLVRCGKSCRLRWINYL 63 79****************************99**********97 PP
2	Myb_DNA-binding	51.7	2.1e-16	69	114	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T +E++ ++++++ +G++ W++Ia++++ gRt++++k+ w+++l PHU04111.1 69 RGNFTSQEEDTIINLHRSFGNR-WSKIASHLP-GRTDNEIKNVWNTHL 114 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 225 aa Download sequence
MGKGRRSCCD KSEVKKGPWT PEEDLKLISF IQKHGHGNWR ALPKQAGLVR CGKSCRLRWI 60 NYLRPDVKRG NFTSQEEDTI INLHRSFGNR WSKIASHLPG RTDNEIKNVW NTHLKKRLLL 120 MKKEEHNSPS STPTCSSTTL GFCSPTSSKA NDQVIDFWEY MLDTSNPTSI NNLDHFDSYS 180 KQDTTSTNTE HHQPQMADEY ECQKWLTYLE IELGLTTNEA QHQIK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G16490.1	5e-72	MYB family protein