PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU04151.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

HD-ZIP

Protein Properties

Length: 251aa MW: 29342.4 Da PI: 9.9832

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU04151.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	56.4	5.1e-18	21	74	4	57
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 + ++t+eq+++Le F +++++ e++ +LAk+lg++ rq+ +W+qNrRa++k+ PHU04151.1 21 KKRLTQEQVKRLEISFDSTKKLEPEQKLQLAKELGVPPRQIAIWYQNRRARWKN 74 5679************************************************95 PP
2	HD-ZIP_I/II	104.6	7.9e-34	20	111	2	93
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 +k+rl++eqvk LE sF++++kLepe+K +la+eLg+ prq+a+W+qnrRAR+k++ lE dy+aL+ ++d+ +e++++eke+e L+ elk+ PHU04151.1 20 NKKRLTQEQVKRLEISFDSTKKLEPEQKLQLAKELGVPPRQIAIWYQNRRARWKNQSLELDYNALQLKLDTTLAEKKQIEKENELLKVELKK 111 79*************************************************************************************99986 PP

Sequence ? help Back to Top
Protein Sequence Length: 251 aa Download sequence
MNNFLNSQYL HKHQSILNHN KKRLTQEQVK RLEISFDSTK KLEPEQKLQL AKELGVPPRQ 60 IAIWYQNRRA RWKNQSLELD YNALQLKLDT TLAEKKQIEK ENELLKVELK KVNEMLIAIK 120 QAQIQDELTQ GSSSFQEDAT SLPKNDYYKK PSVPKDDDKK VSFVPNYYKV PSSSKQEYKA 180 PSLSKNDYYK KPSVSKDDDK KAPFVPNYYK VPSLSKNDYC KKPSVPKDDD KKALYVPKDN 240 YHKISSVPKQ D

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69780.1	4e-25	HD-ZIP family protein