PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU04262.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

bHLH

Protein Properties

Length: 505aa MW: 57433.7 Da PI: 4.8867

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU04262.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	26.7	1e-08	16	65	6	54
HHHHHHHHHHHHHHHHHHHCTSCCC....TTS-STCHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkas.kapskKlsKaeiLekAveYIksL 54 + +E++RR+++++ +++L ++lP+ + +++ K++ + Av+YI sL PHU04262.1 16 KYVEKNRRNHMKNLYNQLHSVLPTHVtTTSKAKMTVPDQIDAAVNYIESL 65 568*******************664888889*************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 505 aa Download sequence
MESCLKSKSA PKLERKYVEK NRRNHMKNLY NQLHSVLPTH VTTTSKAKMT VPDQIDAAVN 60 YIESLKMNLE KSKQQLKELK LGPKRAQSLN ATNEPGPSTK SPTQIEFHEM GLDVVVVLIT 120 GLDNIATFNN IIRLCHREEG VEVVSTSFKL NGDSTLQIYR ETKVHINRNS TMKFTATTLC 180 DKMKELIYGP SCNNDRESNL HCIVESKLLG FNALELNESS TMKFRDTIVC DKTKELVYEK 240 SCNNDMEFNL HLRDDIVEFE RLESDVLEQH RSSTMEFRAT TMCDNSKELI HGPSYNNDMN 300 SNLHLWDDIV ESEMLGFDAL EQHRRSTMEF RATTICDNSK ELVHGTPCNN DMDSNLHLWD 360 DIVESKMLGF GTLEVHRSST MEFRAITICD NSKELIHGPP CNNDTDSNIH LWDGIVESEM 420 LGFDALELNK SSTMEFGATT MSDNSKELIH GPPCNNDMDS DLHLWNGIFE SELLGFDALE 480 LMPTSSQIPN MPSNYVQNVY ETASF

Sequence ? help Back to Top

Protein Sequence Length: 505 aa Download sequence

MESCLKSKSA PKLERKYVEK NRRNHMKNLY NQLHSVLPTH VTTTSKAKMT VPDQIDAAVN  60
YIESLKMNLE KSKQQLKELK LGPKRAQSLN ATNEPGPSTK SPTQIEFHEM GLDVVVVLIT  120
GLDNIATFNN IIRLCHREEG VEVVSTSFKL NGDSTLQIYR ETKVHINRNS TMKFTATTLC  180
DKMKELIYGP SCNNDRESNL HCIVESKLLG FNALELNESS TMKFRDTIVC DKTKELVYEK  240
SCNNDMEFNL HLRDDIVEFE RLESDVLEQH RSSTMEFRAT TMCDNSKELI HGPSYNNDMN  300
SNLHLWDDIV ESEMLGFDAL EQHRRSTMEF RATTICDNSK ELVHGTPCNN DMDSNLHLWD  360
DIVESKMLGF GTLEVHRSST MEFRAITICD NSKELIHGPP CNNDTDSNIH LWDGIVESEM  420
LGFDALELNK SSTMEFGATT MSDNSKELIH GPPCNNDMDS DLHLWNGIFE SELLGFDALE  480
LMPTSSQIPN MPSNYVQNVY ETASF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G20970.1	5e-14	bHLH family protein