PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU04297.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family YABBY
Protein Properties Length: 187aa    MW: 20883.8 Da    PI: 7.9292
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU04297.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY2274.8e-70231816170
       YABBY   6 sseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkee..lleelkveeenlksnvekeesastsvssekls 102
                 s eq+CyvqCnfC+t+lavsvP +s fk vtvrCGhCt+llsvn+     + a + hl +s+  +  ll+e +++  +l +n+  + +     +s  ++
  PHU04297.1  23 SGEQLCYVQCNFCDTVLAVSVPCSSFFKNVTVRCGHCTNLLSVNIILP--TAANQLHLPHSFFSPqnLLDEIRNNPPTLLMNQPINPN-----ES-LMP 113
                 579***************************************998755..45566778888765523667776666666555433322.....22.357 PP

       YABBY 103 enedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170
                     +e+p++p ++rPPekrqrvPsaynrfik+eiqrika+nPdishreafsaaaknWahfP+ihfgl
  PHU04297.1 114 VRGVDELPKPPVANRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGL 181
                 788999***999******************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 187 aa     Download sequence    
MSSSSAAFAP DHHLHHHHLS PPSGEQLCYV QCNFCDTVLA VSVPCSSFFK NVTVRCGHCT  60
NLLSVNIILP TAANQLHLPH SFFSPQNLLD EIRNNPPTLL MNQPINPNES LMPVRGVDEL  120
PKPPVANRPP EKRQRVPSAY NRFIKDEIQR IKAGNPDISH REAFSAAAKN WAHFPHIHFG  180
LMPDQPV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45190.13e-73YABBY family protein