PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU04475.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 341aa MW: 39176.6 Da PI: 6.552

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU04475.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	171.9	2e-53	15	143	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 +ppGfrFhPt+eel+++yLkkkv+++k++l +vi+evd++k+ePwd+++k+k +++wyfFs++dkky+tg+r+nrat++g+Wkatg+dk ++s + PHU04475.1 15 VPPGFRFHPTEEELLQYYLKKKVANEKIDL-DVIQEVDLNKLEPWDIQEKCKIgstPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKVIYS-N 111 69**************************.9***********964444222455**********************************.9 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 ++ +g++ktLvfykgrap+g+k+dW+mheyrl PHU04475.1 112 SQRIGMRKTLVFYKGRAPHGQKSDWIMHEYRL 143 99**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 341 aa Download sequence
MPDDMSISVN GQSQVPPGFR FHPTEEELLQ YYLKKKVANE KIDLDVIQEV DLNKLEPWDI 60 QEKCKIGSTP QNDWYFFSHK DKKYPTGTRT NRATAAGFWK ATGRDKVIYS NSQRIGMRKT 120 LVFYKGRAPH GQKSDWIMHE YRLDDHINDI HSCTIVCNVV MGESTQEEGW VICRIFKKKN 180 HFKSLETISP TASQSVPHTT ISHRLCDNDE RALEQLFHYM RSSTCKEENN VINNYDTNFH 240 DKFMQLPSLD SPNSSSGDHP KSINCDQGGL NNWIAVARLV ASHLNGQTIN DYNHDYEHQY 300 NTNIVGGSST NHDYQEESCD LWSFSRVSTN DSLCHVSNGM I

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46770.1	1e-114	NAC family protein