PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU04612.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

MYB

Protein Properties

Length: 222aa MW: 26309.5 Da PI: 7.5939

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU04612.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.2	1.4e-16	9	56	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEd++lv +vk++G ++W+ a+ g++Rt+k+c++rw +yl PHU04612.1 9 RGPWTEEEDLQLVFYVKLFGDRRWDFLAKVSGLKRTGKSCRLRWVNYL 56 89********************************************97 PP
2	Myb_DNA-binding	52.5	1.1e-16	62	107	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T++E+ ++++ ++G++ W++Iar+++ gRt++++k++w++++ PHU04612.1 62 RGKMTPQEERVVLELHSKWGNR-WSRIARKIP-GRTDNEIKNYWRTHM 107 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 222 aa Download sequence
MAQEEIMRRG PWTEEEDLQL VFYVKLFGDR RWDFLAKVSG LKRTGKSCRL RWVNYLNPDL 60 KRGKMTPQEE RVVLELHSKW GNRWSRIARK IPGRTDNEIK NYWRTHMRKK AQEQRKKSSI 120 SPSSSFSNSS YSSSISHEEN ERNFYDTGGL ELLKAEGEMK SSDQEQGGES MKIYSMDEIW 180 KDIELLEENE ETTNKPIMGS ISPLWDYSLD SLWKDFDWSS FR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G46130.1	7e-75	MYB family protein