PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU04705.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

MYB

Protein Properties

Length: 282aa MW: 31893 Da PI: 7.8209

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU04705.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.8	2.2e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEde+l+d+++ +G g+W++ ++ g+ R++k+c++rw +yl PHU04705.1 14 KGAWTKEEDERLIDYIRAHGEGCWRSLSKPAGLLRCGKSCRLRWINYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	57.9	2.3e-18	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++T+eEdel+++++ +lG++ W++Ia +++ gRt +++k++w+++ PHU04705.1 67 RGNFTEEEDELIIKLHSLLGNK-WSLIAGRLP-GRTNNEIKNYWNTH 111 89******************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 282 aa Download sequence
MGRSPCCEKA HTNKGAWTKE EDERLIDYIR AHGEGCWRSL SKPAGLLRCG KSCRLRWINY 60 LRPDLKRGNF TEEEDELIIK LHSLLGNKWS LIAGRLPGRT NNEIKNYWNT HIRQKLLSRG 120 IDPTIHRSIN EPTPKVTTIT FAAAADSTDD HHRDQKINIK AEFDETSNED NNEVPKMSCL 180 PDLNLELRIS PPHHQQLDHH HQRSNSLCFT CSLGIQNSKD CSCNNTNGIG CSNNIVSMNI 240 VTGISLCCLN AAVLPPNPSR HETEVWMGAF AVSDSINRFQ RC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38620.1	5e-99	MYB family protein