PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU04796.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

G2-like

Protein Properties

Length: 110aa MW: 12578.2 Da PI: 10.1702

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU04796.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	93	2.4e-29	61	110	2	51
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 +rlrWtp+LH+rFv+ave+LGG+++AtPk +l+lm++kgL ++hvkSHLQ PHU04796.1 61 ARLRWTPDLHRRFVHAVERLGGHDRATPKLVLRLMDIKGLNIAHVKSHLQ 110 79***********************************************9 PP
2	Myb_DNA-binding	49.1	1.3e-15	62	110	1	45
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwq 45 r+rWT++++ ++v+av++lGg+ t+k++ r m kg+ ++ks++q PHU04796.1 62 RLRWTPDLHRRFVHAVERLGGHdraTPKLVLRLMDiKGLNIAHVKSHLQ 110 89*********************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 110 aa Download sequence
MEDSGGTEFS KTSPNSDKYV DEDENTWIKL QKDGGSSSNS TVEESREKKI SVRSYVRSKM 60 ARLRWTPDLH RRFVHAVERL GGHDRATPKL VLRLMDIKGL NIAHVKSHLQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	8e-34	G2-like family protein