PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU04850.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 300aa MW: 34522.3 Da PI: 6.6787

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU04850.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	151	5.8e-47	11	138	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kgel 99 pGfrFhPt+eel+ +yLk+kv g+kl+ +vi ++iy+++PwdLp ++ +e+ewyfF++r +k+ +g r+nr+t++g+Wkatg+dk+++ ++ PHU04850.1 11 PGFRFHPTEEELLEFYLKNKVLGRKLQRCDVIGLLNIYSHDPWDLPGLATIGEREWYFFVPRYRKHGSGGRPNRTTQKGFWKATGSDKKIFGLshPRNI 109 9**********************9999*************8777899*********************************976556778 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 +glkktLvfy+grap+g+ktdWvm+e+rl PHU04850.1 110 IGLKKTLVFYTGRAPRGSKTDWVMNEFRL 138 *************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 300 aa Download sequence
MEESAMELDL PGFRFHPTEE ELLEFYLKNK VLGRKLQRCD VIGLLNIYSH DPWDLPGLAT 60 IGEREWYFFV PRYRKHGSGG RPNRTTQKGF WKATGSDKKI FGLSHPRNII GLKKTLVFYT 120 GRAPRGSKTD WVMNEFRLPD PFSSPQDIVL CKIYRKATSL KVLEQRAAIE EEIKTAKHVD 180 VSPCSITQPI DTVSFCNEHH ELMATSITYQ SHGFLMSIAK DEVEEDILSV TENNQYEVSG 240 EVKGESNYFR PKLLNGQDNL AELHVPKFSM DFSQDPVWMQ LRSPWLDNFS LTPSAFVHNF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17040.1	9e-98	NAC family protein