PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU05039.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family MYB
Protein Properties Length: 282aa    MW: 32631.5 Da    PI: 6.8689
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU05039.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.72.6e-083076347
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47
                     +WT+eE + + da +++ ++   +W  +a++++ g+t  ++   ++ +
       PHU05039.1 30 KWTPEENKMFEDALALFDKEtpdRWYYVASMIP-GKTVDDVMKQYREL 76
                     8*****************99*************.*******9999977 PP
2Myb_DNA-binding46.39.9e-15144188347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ +++ + k++G+g+W+ I+r + ++Rt+ q+ s+ qky
       PHU05039.1 144 PWTEEEHRQFLLGLKKYGKGDWRNISRNFVTTRTPTQVASHAQKY 188
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
MNSEMELFSP PQATYLRNSN WLFEENKGTK WTPEENKMFE DALALFDKET PDRWYYVASM  60
IPGKTVDDVM KQYRELLEDI TDIEAGLIPI PGYTTSSNSF TLEWINQDHE EGIFHDFNKQ  120
FYGPSGKRST SNRYSEHERK KGVPWTEEEH RQFLLGLKKY GKGDWRNISR NFVTTRTPTQ  180
VASHAQKYFI RQLSGGKDKR RSSIHDITTV NLTEMKSPSP ENHISSSSPD KSVPSPQKAL  240
CEYNFPNQEA VIGFKTYGLK LHEHGMHSVI LQGLQFGQYN TM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38090.11e-109MYB family protein