PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU05080.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

TALE

Protein Properties

Length: 587aa MW: 65469.4 Da PI: 7.8356

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU05080.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27.6	5.1e-09	389	421	22	54
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 ++yp+ +++ LAk++gL+ +qV++WF N R + PHU05080.1 389 HPYPTDSDKVMLAKRTGLSRNQVSNWFINARVR 421 89*****************************88 PP
2	BELL	84.6	1.2e-27	243	312	3	72
BELL 3 qelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 e+++ k+ L+s+l+eV+k+Ykqy++qlq v++sFe v glg+a+p+++ ka+S+hFrcLk ai++q+ PHU05080.1 243 SEHRRNKSNLVSMLDEVYKKYKQYYQQLQGVVASFESVPGLGNAAPFANQSIKALSKHFRCLKKAISDQM 312 68999**************************************************************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 587 aa Download sequence
MAAEGFEAYH VPQQSRRDRL RGGVSDCTVF PSFYNDQSLL NPSDLLLLSH NKQKSLHFMD 60 PQISSSFQEI NNTPPFLYNT QQSTFDVVYK QEQISSAAHE PNITTTHNNN NNNNSSNNYV 120 STGQGLSLSL SYQPHHQNQL IRTSTSNSTV PLELNLQRYD SSLFVAAANE LSSKSNSSTI 180 LGPFTGYASI LKGSRFLKPA EQLMEQICDV GNNNKGIYAE KFVEVDDVVV MDLSPDASDD 240 DGSEHRRNKS NLVSMLDEVY KKYKQYYQQL QGVVASFESV PGLGNAAPFA NQSIKALSKH 300 FRCLKKAISD QMNYTIKSHS HSSQINCDDS TSTKLVGKDK LNYNNFQRAT AIHNAGFVEH 360 HQPVWRPQRG LPERAVTVLR AWLFDHFLHP YPTDSDKVML AKRTGLSRNQ VSNWFINARV 420 RLWKPMVEEI HMLETRQAHK SASQRGQNNN NTVEVNFPTS NNSLPSDQNP STSSAQQFQQ 480 VPSKRTRNND PTDHMNLSYD NFSPRSRVGI DQVGVSSGGN GGVSLTLGLH HQNNNGTGIG 540 GLSTDPFPRN AARRFGIDAS NEGFMFGGGF EAPNRQFEGQ LLHDFVG

Sequence ? help Back to Top

Protein Sequence Length: 587 aa Download sequence

MAAEGFEAYH VPQQSRRDRL RGGVSDCTVF PSFYNDQSLL NPSDLLLLSH NKQKSLHFMD  60
PQISSSFQEI NNTPPFLYNT QQSTFDVVYK QEQISSAAHE PNITTTHNNN NNNNSSNNYV  120
STGQGLSLSL SYQPHHQNQL IRTSTSNSTV PLELNLQRYD SSLFVAAANE LSSKSNSSTI  180
LGPFTGYASI LKGSRFLKPA EQLMEQICDV GNNNKGIYAE KFVEVDDVVV MDLSPDASDD  240
DGSEHRRNKS NLVSMLDEVY KKYKQYYQQL QGVVASFESV PGLGNAAPFA NQSIKALSKH  300
FRCLKKAISD QMNYTIKSHS HSSQINCDDS TSTKLVGKDK LNYNNFQRAT AIHNAGFVEH  360
HQPVWRPQRG LPERAVTVLR AWLFDHFLHP YPTDSDKVML AKRTGLSRNQ VSNWFINARV  420
RLWKPMVEEI HMLETRQAHK SASQRGQNNN NTVEVNFPTS NNSLPSDQNP STSSAQQFQQ  480
VPSKRTRNND PTDHMNLSYD NFSPRSRVGI DQVGVSSGGN GGVSLTLGLH HQNNNGTGIG  540
GLSTDPFPRN AARRFGIDAS NEGFMFGGGF EAPNRQFEGQ LLHDFVG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02030.1	1e-91	TALE family protein