PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU05094.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family FAR1
Protein Properties Length: 166aa    MW: 18768.3 Da    PI: 5.2719
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU05094.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR138.63.5e-123781145
        FAR1  1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeek 45
                ++YneYA ++GFsvrk++ +ksk +g it+r+f+C+ke +r ++k
  PHU05094.1 37 NYYNEYAANIGFSVRKEYVNKSKAHGYITSRRFTCYKESYRGKDK 81
                69************************************9998875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 166 aa     Download sequence    
MVDSMKTVSL NGHNDTSHSC EPIKLGMKFD SDEDGFNYYN EYAANIGFSV RKEYVNKSKA  60
HGYITSRRFT CYKESYRGKD KFGPPELDFV TVRWSFWGLR IEVLVGVIVD VAEVHLPLLL  120
LFEAVRSFGW VESGFCILYA GASGGEGMGR VMDDLRWVDG WVVGPE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06250.16e-12FAR1 family protein