PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU05221.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family WRKY
Protein Properties Length: 232aa    MW: 26729.1 Da    PI: 7.836
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU05221.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY811.2e-25119180159
                 ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                 +dDg+ WrKYGqK++ +++fpr+Y+rCt++   gC++ k+v+r +e+p ++ itY g+H+++
  PHU05221.1 119 VDDGHGWRKYGQKQILNAKFPRNYFRCTHKfdqGCQASKQVQRIQENPPLFRITYYGHHTCK 180
                 59***************************9999***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    
MESFLLENTI SDLEKVMEEL NRGKKFTRRL REIIKKPKIN VGNEDAYMSS AEDLVGKIMN  60
SFCASLSILS SDESTEEVSQ KSMEDSSGSC KTSSLKDRRG CYKRRRTLET SIKETSTLVD  120
DGHGWRKYGQ KQILNAKFPR NYFRCTHKFD QGCQASKQVQ RIQENPPLFR ITYYGHHTCK  180
TFPKVSQMIF DSPNDQGDSN SVLLNFNSGN NHHQFLDMTV ETLDFVDLSF EF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.12e-43WRKY family protein