PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU05445.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NAC
Protein Properties Length: 270aa    MW: 30888.3 Da    PI: 4.7404
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU05445.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM39.61.6e-1218114698
         NAM   6 rFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpk..kvkaeek.ew.yfFskrdkkyatgkrknr.atksgyWkatgkdkevlskkge 98 
                 rFhPtde l+ +yL k v  k+ ++ + i+  d+y   +P+++ +  ++  e++ ++ yfF++ +kk+  g+r    ++  g Wk+   +k+v++  ++
  PHU05445.1  18 RFHPTDEKLI-RYLLKFVCCKDYSC-DNIRLEDLYGNkKPREIFEsnSLGDEDTkKVrYFFTQLKKKKLDGTRFIStVIGGGSWKELDGEKSVYDGPKK 114
                 9*********.99*********999.7899999996549****632333333332336***************9997899*************994333 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MSWTCPVGRV DRILSNKRFH PTDEKLIRYL LKFVCCKDYS CDNIRLEDLY GNKKPREIFE  60
SNSLGDEDTK KVRYFFTQLK KKKLDGTRFI STVIGGGSWK ELDGEKSVYD GPKKTLSCVA  120
LSVRLMYMLV IIRNYVIICL WKDVAAMDAI LPITQQHGSC LLNQFISSEH NNVFHELQQD  180
QNSEQLIKQI ESTCMVLNEG NIDVAAFLSD QWSTCCEEQV LNLEEAEPIT FTEPTASLVI  240
NSDKYFPMNG LFDTGDFIAT DLSWTSDLVD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.17e-10NAC family protein