PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU05498.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

FAR1

Protein Properties

Length: 727aa MW: 83418.5 Da PI: 8.4237

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU05498.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	29	3.5e-09	4	49	32	90
FAR1 32 tfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 ++vCskeg+++ ++rtgC a ++v++ + +gkw+++++++eHnH++ PHU05498.1 4 RYVCSKEGFQT--------------SSRTGCPAFIRVQRVDdSGKWVLANVNKEHNHAME 49 55666666554..............579*********999*************985 PP
2	FAR1	61.8	2.1e-19	162	236	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 +fY++YA ++GF+vr+ + +sk++g+it+r+fvCskeg++++ +r+gC a ++++++ +g+w v+++++eHnHel PHU05498.1 162 EFYHSYAVNTGFRVRIGQLFRSKNDGSITSRRFVCSKEGHQHP--------------SRVGCGAFMRIQRQATGRWLVDRCHNEHNHEL 236 6************************************9998..............4899************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 727 aa Download sequence
MSRRYVCSKE GFQTSSRTGC PAFIRVQRVD DSGKWVLANV NKEHNHAMEN ADETCVPKIV 60 QRKVVVDRTV KLKSKSSSGL RSFDDDGPSS RSGVVDFKRV VNQTTKLKSS TGLRSLDEDD 120 GLSGRCGVID FKRVRRERVN GESRGGEPYK GLEFVTAGEA YEFYHSYAVN TGFRVRIGQL 180 FRSKNDGSIT SRRFVCSKEG HQHPSRVGCG AFMRIQRQAT GRWLVDRCHN EHNHELGLPG 240 DVSERVSLKG FKEEGSCELE NMDLVESNGG LSLVTRSRES RIGSDWYNEL FDYFQSRQAE 300 DMGFFYAVEV HKGRAMSVLW ADSRSRFACT QFGDAVVFDT TYRRGSCLVP LALFVGVNHH 360 RQPVLLGCAL IAEESEESFT WVFQAWLRAM SGRCPISIVA DQDRAILHSV AQVFPGTHHR 420 FSPWQVVAKE QEAIGALRSM NPEFKYEYET CISQSQTPNE FEAAWNVLIN KYNLRENTWL 480 KEMYNMRKSW VPLYIRGTFF AGIPIDGSFK SYFGNILTSQ APLCEFIIRY EKSLEQRREE 540 ERKEDFNSFN LQPVLHTKDP IEDQGRRLYT ITMFKVFQKE LLECYSYVAI KINVEGAISR 600 YLVQKCGNGD ERNTVAFNAS NLNISCSCKM FEFEGVLCRH ALKVFQIMNI RELPSRYILH 660 RWTKDAKYGI LRDVDSGGTS QDYKALMLWS LREEAKNYIE AGTTSLERYK LAFEIMQEGR 720 RNLCWQN

Sequence ? help Back to Top

Protein Sequence Length: 727 aa Download sequence

MSRRYVCSKE GFQTSSRTGC PAFIRVQRVD DSGKWVLANV NKEHNHAMEN ADETCVPKIV  60
QRKVVVDRTV KLKSKSSSGL RSFDDDGPSS RSGVVDFKRV VNQTTKLKSS TGLRSLDEDD  120
GLSGRCGVID FKRVRRERVN GESRGGEPYK GLEFVTAGEA YEFYHSYAVN TGFRVRIGQL  180
FRSKNDGSIT SRRFVCSKEG HQHPSRVGCG AFMRIQRQAT GRWLVDRCHN EHNHELGLPG  240
DVSERVSLKG FKEEGSCELE NMDLVESNGG LSLVTRSRES RIGSDWYNEL FDYFQSRQAE  300
DMGFFYAVEV HKGRAMSVLW ADSRSRFACT QFGDAVVFDT TYRRGSCLVP LALFVGVNHH  360
RQPVLLGCAL IAEESEESFT WVFQAWLRAM SGRCPISIVA DQDRAILHSV AQVFPGTHHR  420
FSPWQVVAKE QEAIGALRSM NPEFKYEYET CISQSQTPNE FEAAWNVLIN KYNLRENTWL  480
KEMYNMRKSW VPLYIRGTFF AGIPIDGSFK SYFGNILTSQ APLCEFIIRY EKSLEQRREE  540
ERKEDFNSFN LQPVLHTKDP IEDQGRRLYT ITMFKVFQKE LLECYSYVAI KINVEGAISR  600
YLVQKCGNGD ERNTVAFNAS NLNISCSCKM FEFEGVLCRH ALKVFQIMNI RELPSRYILH  660
RWTKDAKYGI LRDVDSGGTS QDYKALMLWS LREEAKNYIE AGTTSLERYK LAFEIMQEGR  720
RNLCWQN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G06250.1	0.0	FAR1 family protein